compare two assembly genomes

Hi everybody! I wold like to compare two assembled genomes, in order to find common regions and regions private to each assembly. Anyone has some advice on how I can compare the two assembled genomes? Which software I can use?

thank you all

assembly pangenome

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updated 5.5 years ago by MSRS

• written 5.5 years ago by gallinaro.martina •

1 answer

BPGA is a good option to find out the bacterial genomic comparison. In this regard, the genebank file format needed.

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written 5.5 years ago by MSRS

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