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Is it possible to use vg in order to compare short sequences (100-mers)?
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5 months ago
genomics0101 ▴ 10

I have a list of about 500 k-mers that I would like to represent and visualize as a variation graph. Assume that k=100 and is fixed. Ultimately, I would like to create a variation graph of all the k-mers.

Is it possible to use vg for such a thing?

vg • 133 views