Download and merge multiple PacBio reads from the same experiment
Hi!
I want to download all the PacBio reads from this experiment: SRS667972 ( SRX668744 - SRX668812) using the SRA-toolkit
I know from a previous post that something like that should work:
for (( i = 744; i <= 812; i++ ))
do
fastq-dump --accession SRX668$1
done
How can I change the loop to merge all the reads together while downloading them?
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