This is a test version of Biostars. For the public version, visit https://www.biostars.org.
How to convert fastq to sra?

NCBI stores data in .sra format. We can download it and convert it into fastq format using fastq-dump from SRA toolkit.

However I want to convert fastq files into sra format to save disk space. Any ideas how to convert fastq to sra?

ncbi fastq compression sra

I think the original question was to convert fastq into .sra format, not fasta format, but perhaps I misunderstood.

Thanks Sean for the correction, I misunderstood the original question.

1 answer

Check this out:

https://github.com/DCGenomics/hackathon_v001_metagenomics

Log in to answer this question.