Converting Coordinates Of Peak File From Hg18 To Hg19
1 answer
Use LiftOver from UCSC. You'll need a chain file and the downloadable executable from here: http://hgdownload.cse.ucsc.edu/admin/exe/ Otherwise, you can use the web interface.
search biostars for annotating with biomaRt, e.g.: http://www.biostars.org/post/show/2936/default-upstream_flank-value-used-in-getbm-in-biomart/ but there are others as well.
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