extract publication titles based on accession number from uniprot in python
Is there any way to extract publication titles based on accession numbers (not UniProt identifiers) from UniProt in python?
I know how to do it in Java using UniProt Java API but wonder if there is any way to do it in python. Thank you!
• 1,760 views
•
link
1 answer
I figured it out.
Firstly, map the accession number into the entry id: https://www.uniprot.org/uploadlists/
Then, https://www.uniprot.org/help/api_retrieve_entries will help out.
Both can be achieved in python.
• 0 views
•
link
Log in to answer this question.
What kind of identifiers do you have if not UniProt identifiers? Have you had a look at the REST API of the UniProt website, https://www.uniprot.org/help/api ?
Thank you very much!