Get drug target proteins from chembl_webresource_client
Hi all,
Anyone know how to retrieve drug target protein by chembl_webresource_client ? I have try to get by following this tutorial but it didnt work
Any suggestion ? Thanks !!!
chembl
python
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Tool: Looking for feedback on a multi Agent Flow using Langraph, LLM and RAG to identify drug for …
written by chinmay.cite 0I have developed a Multi agent pipeline which has the following flow: 1. Identify disease from the user query. 2. Identify gene associated with the …
-
BLASTP error - too many positional arguments
written by Paula 6Hello! I am trying to obtain the functional annotation of multiple protein files in a folder using BLASTP. I am using Parallel to parallelize the …
-
Accessing COSMIC database via Python script
written by maria_giulia_carta 0Hi everyone! I have a list of VEP somatic variants related to cancer data and I would like to query the COSMIC database by HGSVc …
-
Fetching GO terms based on gene IDs using Entrez e-utilities
written by Shraddha 10Hello all, I'm trying to access GO terms for a list of genes, but they're not easily available. Manually, these are the steps I'd take: …
-
CNV kit merge all my gene names together
written by manojkumarbioinfo 10Hi, I'm using cnv kit for my copy number variant analysis, I'm facing some issues whenever I call CNV my gene names are combined together …
-
Get data from KEGG Brite
written by sizeineb 0Hi, I would like to retrieve all the interactions between ligands and target proteins from the KEGG BRITE database. Ideally, each entry will contain a …
-
How to retrieved protein Fasta sequence from accession number by Entrez
written by Nelo 2AF131201 AF326487 AF326488 AF326489 AF326490 This are the some the accession number of protein. Firstly i dont know what kind of accession number is this. …
-
Comprehensive & integrated drug/target database?
written by sam237337 7The [Drug2Gene resource][1] integrates 19 different drug-target databases, and is distinguished by its standardization and unification across those different platforms (including ChEMBL, DrugBank, Uniprot, HGNC …
-
How to retrieve DNA sequence from GI number using Biopython?
written by Charles Yin 18I try to use Biothon to retrieve DNA sequence, the following code can get DAN sequence by a GenBank access number, but cannot get sequence …
-
Tutorial: Open Targets and programmatic access
written by Denise CS 525If you are working in `disease biology`, `drug discovery` and/or `target identification`, the chances are you have seen our previous post on the [Open Targets][1] …