Plink command to remove complementary SNPs
Hi all, I would like to know if there exists any way to exclude variants from a chip dataset according to their genotype. I want to remove from my dataset all the variants that have complementary genotypes, such as GC or AT, to avoid problems when merging with other datasets. Is there any way to directly do this with plink? Any suggestion would be great! Thanks in advance, Iriel
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irieljoerin •
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