Error using gometh from missMethyl
I am trying to use the gometh function from missMethyl (which I have used several times before). The command I am running is:
go<-gometh(sigcpgm,allcpg,collection="GO",array.type="EPIC")
However I get the following error:
Error in BiasedUrn::pWNCHypergeo(results[i, "DE"], results[i, "N"], Nuniverse - :
Invalid value for odds
I understand this could be related to the sig cgs mapping to the same GO term, but I'm wondering how to proceed with the analysis/ overcome the error if possible.
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sara.pischedda01 •
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olivia.grant •
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olivia.grant •
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Hi, I am using the same package with EPIC Methylation data. I get the same error, were you able to solve it?