Using Pacbio fastq file for Arrow polishing of Canu assembly
Hi everyone,
Would anyone be able to guide me through using Arrow to polish my Canu assembly? I was reading up online and most of them seems to start from the raw .h5 files. All I have now is the fastq files from the PacBio sequencing. Is it still okay? Alternatively, are there other polishing software that works well with PacBio data? This is my first time doing this so any help is very much appreciated!
Thank you
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