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RNAseq example data

Hi!! I'm looking for an example dataset from RNA-seq expression data that have a time variable. I mean, what I need is some data measured over time and across tissues and genes that I could use for functional data analysis and time series. Does anyone know where I might find this kind of datasets? I would also be fine with other types of genomic data (methylation, mrna expression...). Thanks in advance!!!

expression rna-seq data next-gen
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updated by ehaag • ehaag • written by rakinitopo • rakinitopo

You could check section 4.8 of the edgeR manual. It contains both links to preprocessed time-course data and also example code and background information.

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written by ATpoint ATpoint

1 answer

You can find a huge amount of data including RNA-seq expression data using the NIAID Data Ecosystem's searchable interface: https://data.niaid.nih.gov

And you can filter by variable measured or other metadata.

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written by ehaag • ehaag

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