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problem with downloading dataset

Hello everyone,

I'm an M.sc student of computer and I'm working on knowledge graph for cancer detection, and I need to download proteins dataset from intact database, how can I download it to access to all proteins for human sapiens which satisfy below features: (the example)

Links 'A' : P04637
Links 'B': Q00987
Species 'A': homo  sapiens 
Species 'B': homo  sapiens
Source Database:  MINT
publication Identifier :  MINT-701366419098711imex : IM-11688
                                    doi : 10.1038/embor.2008.231
Confidence Value : intact-miscore : 0.99
intact database
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updated by zx8754 zx8754 • written by sepidehafshar303 • sepidehafshar303

1 answer 

$ wget -q -O - "ftp://ftp.ebi.ac.uk/pub/databases/intact/current/psimitab/intact-micluster.txt" | grep -F P04637 |grep -F Q00987 | grep -F '10.1038/embor.2008.231'
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written by Pierre Lindenbaum Pierre Lindenbaum

thanks for answering, but what I purpose is to access all the protein interactions included in breast cancer and stomach cancer. do you reckon this code is going to solve my problem? I mean, is there any option in this database that I can do that?

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written by sepidehafshar303 • sepidehafshar303

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