how about 3d-dna
how about 3d-dna. Especially for highly heterozygous genomes.and,Juicer Tools how to manually correct,
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I think ALLHiC will perform better than 3d-dna. See that paper:
Assembly of allele-aware, chromosomal-scale autopolyploid genomes based on Hi-C data
Xingtan Zhang, Shengcheng Zhang, Qian Zhao, Ray Ming & Haibao Tang
Nature Plants volume 5, pages833–845(2019)
I have used it and it really easy to use and to install.
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Please edit your question and add more detail. I doubt anyone here can understand what you're referring to.
This questions is badly posed but is about valid tools. See this link for help. You don't say if you have Hi-C data.