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mpileup error : Note: none of --samples-file, --ploidy or --ploidy-file given, assuming all sites are diploid

mpileup return==>Note: none of --samples-file, --ploidy or --ploidy-file given, assuming all sites are diploid

I work on bacteria ,

what should i do in this case ???

thanks

mpileup
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written by sami • sami

1 answer

With not much more context the answer now is giving --ploidy 1 to your command.

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written by gb gb

I work on mycobacterium tuberculosis complex .

thank you . i ll try --ploidy 1

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written by sami • sami

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