Hi, I'm studying the article about NIFTY test as literature review (https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3544640/). And I have some problems that I cannot understood. Its about the fomular …

It is my understanding that k-mer coverage with regards to sequencing data is simply the distribution of k-mers across the raw sequencing reads and have …

Hello, I am performing a K-mer based GWAS on my dataset. I have obtained some k-mers that are significantly associated with the trait of interest. …

hello everyone i have 14 whole genome, but i don't know anything about those coverage and sequencer platform's. in the first step it is important …

hello every one I don't know the mean of Genomic Content and estimate genomic content, is the GC -Content one of the Genomic content but …

Hello every one i don't know mean of the" k-mer coverage cutoff" if every one know abou it ,please help me . best wish.

Hello everyone. Recently, I want to study TCGA data. I can't know the FPKM_UQ calculation formula relate with its depiction from TCGA website. They say …

I produced list of kmers from WGS data which have coverage above a certain threshold or cut-off by using GenomeTester4 glistcompare. The command is: *GenomeTester4/bin/glistcompare …

Hello members, The following statement is taken from this paper http://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-14-160 **we should not distinguish between a k-mer and its reversed complement, and by the …

<p>Is Velvet using k-mer coverage values instead of nucleotide coverage in its parameters?</p> <p>Suppose, for example, that my average read length is 36bp and k-mer …