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summury control quality assembly the all genome sequencing

At bioinformatics college,

I've assembled 145 genomes and I wanted to know about the different contigs quality control parameters. How can I get a tabular report of all genomes at once (Tab or csv). I know QUAST and Assembly-Stat, BBmap.but it gives a file for each genome.

Thanks to community. Best regards.

control-quality assembly
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updated by Istvan Albert Istvan Albert • written by AbdelAbdel • AbdelAbdel

1 answer

MultiQC can parse the output of several different tools and collate them into one report

https://multiqc.info/

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written by Istvan Albert Istvan Albert

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