Extract only FASTA headers (+order) from FASTA file
Hi @ll!
Funannotate has renamed my contigs and I the resulting GFF file only mentions the renamed contigs. Now, I would like to replace them with their original names - but for that purpose, I would need a way to extract the FASTA file headers in the original order from the reference genome FASTA file that I gave to funannotate. Might you know of a way how to do so?
Thank you for your help!
Joe
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