Turn Off Multithreading In Pymol

By default, pymol seems to grab the number of cores on the system for rendering. How can I force it to only use one core?

pymol

• 4,520 views • link

updated 14.3 years ago by Rm

• written 14.3 years ago by hooked •

1 answer

Try: set max_threads, 1

For more insight : follow this "pymol-users" thread: http://www.mail-archive.com/pymol-users@lists.sourceforge.net/msg03110.html

• 0 views • link

written 14.3 years ago by Rm

More posts like this

Tutorial: Parallel AUGUSTUS Execution via GNU Parallel
written 1.8 years ago by Vijith •

Hi, fellow bioinformaticians, I recently ran AUGUSTUS for ab initio gene prediction on my 2.6GB plant genome using an 8-core server with 244GB memory. However, …
How to enable multiple cores/threads for Bowtie2 or BWA using Macbook M2 chip?
written 3.5 years ago by weixiaokuan

Dear Community, I am trying to use bowtie2 or bwa multi-core/threads option to align my reads to genome (-p 4). I am using a MacBook …
Can snakemake work with multiple nodes from HPC?
written 7.8 years ago by wangdp123

Hi there, I am thinking about how to use snakemake under the HPC system. Can snakemake work with multiple nodes from HPC? For example, I …
cuffdiff 2.2.1 not responding to -p (--num-threads) option to run in parallel on cluster
written 9.2 years ago by r.poole •

Hi all, I am trying to run cuffdiff 2.2.1 using the option -p (--num-threads) 4, so that it will run on 4 cores on our …
How to let WGCNA use multiple cores
written 9.3 years ago by syrttgump •

Hi guys, I am using WGCNA to deal with some large datasets (~20000 genes on ~1000 samples). I read in the help documents that WGCNA …
RAY assembler. running time/memory usage
written 9.8 years ago by Nastasiia •

We have 2x7.7 Gb paired end ~100bp reads. With kmer=45 option RAY assembled it for ~2h10m on 16 core 32 Gb node. Suspecting it's too …
Buying computational resources vs. renting allocation on cluster
written 10.6 years ago by ebrown1955

My lab is about to receive about WGS (30X) data (fastqs) on about 400-1500 samples (depending on how many we get at a time) that …
Having Problem In Installing Pymol
written 12.4 years ago by nazaninhoseinkhan

Hi all, I am trying to install PyMol on my laptop, but after installation whenever I try to open the program, only PyMol viewer is …
Bowtie2 '-P' Threads
written 12.5 years ago by fire_water

Hi, I will be using Bowtie2 to trim and map paired-end reads from FASTQ files stored on a USB drive. I noticed Bowtie is equipped …
How Can I Draw A Rod In Pymol?
written 13.7 years ago by yotama9 •

I have a 3d system I visualize in pymol. I'm using the simple xyz file format where I give pymol the name of the molecule …