How can deleted specific sequences of alignment file without change to the sequences aligned?
How can deleted specific sequences of alignment file without change to the sequences aligned?
I have a alignment file (from clustal omega) with much sequences. The alignments are very good, but I need to deleted some specific sequences (for name) without changer the alignment.
Thanks for your time
Algas2006
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Xiang Li •
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algas2006 •
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algas2006 •
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If your sequences are not so many, maybe you can use Mega to delete those sequences. If there are over hundreds of sequences, maybe you can write a python script to solve it. From my opinion, I will list a file of seq names(.txt or .xlsx), then you can use regular expression to match those sequences and delete them. Hope can help you.
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