Is there any program for automatically assess multialignment
1 answer
You can try use Unipro UGENE (http://ugene.net/)
1. Open your multiple alignment file
2. Open statistics tab and enable distance column (https://ugene.unipro.ru/wiki/display/UUOUM20/Statistics)
Or create distance matrix by click in main menu "Actions"->"Statistics"->"Generate distance matrix" (https://ugene.unipro.ru/wiki/display/UUOUM20/Distance+Matrix)
• 0 views
•
link
written
by
dendrov.kan •
Log in to answer this question.
More posts like this
-
GPU-accelerated multiple sequence alignment tools
written by jet •
-
Percent identity matrix from ClustalOmega/Clustalw with Biopython
written by sean.cascarina •
-
Clustal Omega alignment algorithm - does it account for codons and open reading frames (ORF)?
written by manaswwm
-
How can deleted specific sequences of alignment file without change to the sequences aligned?
written by algas2006 •
-
Clustal Omega and bootstrapping
written by Antonio R. Franco
-
Aligning Copies Of A Protein Domain To A Pfam Model (HMM)
written by UnivStudent
-
Automated sliding window analysis of % identity on a Clustal Omega DNA alignment
written by c.merrick •
-
Is there any software to convert clustal alignment file to png image
written by siso •
-
Can I get only distance matrix from Clustal Omega
written by siso •
-
Downloading multiple sequence alignment as clustal format file from clustal omega.
written by siddharth.avadhanam •
