Hi everyone! I'm trying to use Pysim-sv simulator to generate germinal and somatic variants. I keep getting "key error" while trying to simulate variants (there's …

Hi there! I have targeted sequencing data from a custom gene panel and am comparing different methods of calling CNVs. Is there a good way …

Does anyone know of an easy way to simulate the offspring between two samples with known genotypes at a panel of loci? (e.g. a vcf …

Hi, I'm looking for a DNA reads simulator which has the ability to simulate reads with UMIs. Is anyone familiar with such a tool? thanks …

Hello, I'm using ExomeDepth to detect CNVs and I'm providing a bed file for all our targeted gene panels. We know there is a processed …

Hello everyone, I need to simulate a few metagenomics samples and I was thinking to use BBMap's simulator, randomreads.sh, in "metagenome" mode. The problem is …

Aslam o Alikum I am beginner in this field, I have vcf files of DOG genome data. Now,I want to detect CNVs from these files.Please …

Hello there, There is a lot of software available for CNV analysis. However, I was wondering if anyone had a particular preference for Ion Torrent …

<p>Hello all, </p> <p>Does anyone know of a good tool that can be used to visualize expression-abundance peaks, perhaps using the .BED file from a …

<p>Hello,</p> <p>Does anyone know a genetics simulation software that can simulate regions under long-term negative-selection? Coalescent simulators such as msms are only capable of simulating …