Conversion of the vcf file of structural variants in bed format
Dear all How can I convert the VCF file of structural variants of the 1000Genomes project into the bed format in order to handle it with bedtools ? Many thanks
• 2,057 views
•
link
written
by
Myosotis1979 •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Validation of Bioinformatics pipeline with NA12763
written by esimonova.me •
-
1000 Genome Project Structural Variants for Illumina
written by Yasin Uzun •
-
How to validate the deletions found in Golden Standard, but not in ngs/3gs?
written by cholingken •
-
How to get individual chromosome sequence in fasta format from vcf.gz and its vcf.gz.tbi file of 10…
written by David Simmons •
-
BWA alignment issue in iPlant
written by aj123
-
Read depths from 1000G exome sequencing are almost all zero.
written by eric.kern13
-
Variant in earlier builds of 1000 genomes not found in later builds
written by jasonlouisstein •
-
Using vcftools to find # mappable positions and # of segregating polymorphisms sites
written by jolespin
-
Vcf File With Variants And Genotypes For A "Single Individual"
written by Nasrin •
-
What With Variants For Chromosome Y (1000Genomes Phase 1 Release)?
written by agnieszka •
Converting a VCF with SNPs and indels to BED format