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Gene Ontology Pathway Formation

I want to ask about something i want to make in my data. I have GO of most enriched genes in each library (i have 3 libraries).These libraries of cDNA done by Illlumina Solax seq. How can i detect or visualize the pathway or the trend that takes place in a each library. If there is a program or web server can help in this point.i am biologist and dont have any experience in programming. Thanks

Amr

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updated by Harold • Harold • written by Barbi G • Barbi G

1 answer

Hi Amr Thank you for asking about GO.

I think you may want to try Go Termfinder, which is a program used for term enrichment analysis. see http://go.princeton.edu/cgi-bin/GOTermFinder You will need your gene list supplied in appropriate ids

Help is provided here http://go.princeton.edu/GOTermFinder/GOTermFinder_help.shtml#requiredOptions

You may also want to contact GO directly at go-helpdesk@mailman.stanford.edu go-helpdesk@mailman.stanford.edu

Harold Drabkin

Gene Ontology Consortium at Mouse Genome Informatics, The Jackson Laboratory, Bar Harbor, ME 04609

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written by Harold • Harold

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