Hi All!! I have searched a lot on how to fetch the subtelomeric region sequences chromosome wise. However I am unable to do that. Does …

So I've sequenced samples with MinION NGS platform, and analysed for SNPs via SAMtools/BCFtools. To corroborate or reject these SNVs I've sequenced the same samples …

Hi All, We have fastq files from a gut microbiome projects. I used 16S metagenomic kit from Ion torrent and sequenced them on Ion PGM, …

I am doing some quality filtering of a large bunch of mixed fastq files produced from multiple versions of Illumina platforms. Thus, the quality scores …

<p>Hi,</p> <p>I am puzzled how to change the encode to Sanger format phred+33 of the data and how to trim the adapter sequence? I have …

<p>I have multiple RNAseq libraries to parse, so I wrote a pipeline using bash and submitted them in batch. Most of libraries ran well and …

<p>Hi I want to represent the presence of certain important regulatory elements for each chromosome separately. I came across a particular paper (figure 2) and …

Review papers on the topic of sequencing technologies. - [Field guide to next-generation DNA sequencers] in Mol Ecol Resour (2011). This paper presents a high …

<p>On their paper here - <a href="http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3175789/">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3175789/</a> - it is announced that Biomart is available as a SPARQL endpoint. Anyone know where this SPARQL endpoint …

<p>Anyone know how to extract full-text articles from PubMed Central in some structured format? The page on the <a href="http://www.ncbi.nlm.nih.gov/pmc/about/oai.html">PMC OAI Service</a> seems relevant, but …