Long read UMI

Hello--

What applications can be used for Pacbio/ONP amplicon library UMI processing? I had install issues with longread-umi due to my WSL environment. fastp (https://academic.oup.com/bioinformatics/article/34/17/i884/5093234) is reportedly LR friendly, has anyone used this for UMI demultiplexing?

-Todd

umi pacbio onp fastp

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written 6.4 years ago by tdfyoder •

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