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RNA Editing sites that leads to codons changes cause the change in amino acid

Hi, I have detected the RNA editing sites by SPRINT tool. after that i predicted the genes in which editing sites are present by bedops tool and out put file is in bed format and SPRINT output file in res format now. now i want to identify the change in amino acid in genes which is caused by change in editing sites? Here is my output file of genes in which editing sites are detected

1A  124189778   124189779|1A    124189772   124190156   TraesCS1A02G117000.1    0   -

1A  124189787   124189788|1A    124189772   124190156   TraesCS1A02G117000.1    0   -

1A  124189792   124189793|1A    124189772   124190156   TraesCS1A02G117000.1    0   -

1A  124189797   124189798|1A    124189772   124190156   TraesCS1A02G117000.1    0   -
rna-seq

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