RNA velocity arrows means
I want to know how arrows are generated in RNA velocity? I read papers but I didn't get clear view of it.
Second thing, can I apply RNA Velocity on the data that has no time points? I have data on adult stage of a species.
Thanks in advance.
1 answer
The arrows point to the predicted future state of their respective cells.
Second thing, can I apply RNA Velocity on the data that has no time points? I have data on adult stage of a species.
Not necessarily - please take a look here: https://jef.works/blog/2020/01/14/rna_velocity_analysis_tutorial_tips/
Kevin
• 0 views
•
link
written
by
Kevin Blighe
Log in to answer this question.
More posts like this
-
RNA-seq profiling of S. cerevisiae fermentation
written by mra •
-
Low read counts in one of three biological replicates. Remove?
written by nadal-t •
-
Time course data analysis
written by Andrew Liu •
-
DESeq2: "model matrix is not full rank"
written by biogrin •
-
scRNASeq of rare heterogenous population with weak response
written by frymor2 •
-
RNA velocity plot demystified
written by firestar
-
Why Fluidigm C1 gives more read counts than iCell8 (wafergen)
written by Za
-
Batch effect correction
written by gstavropoulos1991 •
-
How to validate results of gene expression clustering in additional datasets?
written by octopuslegs11 •
-
Circos and RNA-Seq Data
written by obbedio •
