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Tool to link a expression pattern to treatments effects

Hi everyone. I was wondering if anyone knows a tool (database) in which I can put a list of differentially expressed genes and it can tell me if this expression pattern is the result of a treatment. Thanks

rna-seq
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updated by i.sudbery i.sudbery • written by francesca3 • francesca3

Please do not use uppercase characters for the title. This is considered shouting. Also please add more details on what exactly you aim to do. Sounds like Gene Set Enrichment Analysis.

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written by ATpoint ATpoint

1 answer

Try the CLUE database. You can also access this data through Enrichr, which also collates other pertubation databases, but the analysis only looks at what genes are changed (it does an enrichment analysis on a list of gene names), rather than in what direction, or how much.

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written by i.sudbery i.sudbery

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