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Mammalian Genome-Wide Mirna Expression Tool

Is there any software for mammalian genome-wide miRNA expression study?

mirna gene software
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updated by Biostar Biostar • written by Anuraj Nayarisseri • Anuraj Nayarisseri

Probably. Can you define more precisely what you want to do?

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written by Neilfws Neilfws

4 answers

You can try microRNA.org - Targets and Expression

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written by Fred Fleche Fred Fleche

may be you can take a look at
CORNA

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written by Sudeep Sudeep

(I agree with the above - this question needs more detail to be answered completely.)

One needs to pay very close attention to how such data were assessed. The rate of discovery of both validated and putative microRNAs is rapid and could make a certain measuring device (i.e, a microRNA chip or array) a bit outdated. In other words, one may find a lot of data for microRNAs that have been known for a long time and a paucity of such data for those recently described.

Several microRNA databases were recently described in publications in the latest (last week) database issue of Nuclei Acids Research.

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written by Larry_Parnell Larry_Parnell

Try downloading everything under Mammalia from http://www.mirbase.org/cgi-bin/browse.pl

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updated by Ram Ram • written by Prateek Prateek

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