Metagenomics Analysis pipeline for Illumina paired end Sequences
I have Illumina paired end Sequences (-phred33) fastq format raw data for metagenomics analysis. How do I use qiime-2 tool for analysizing, please suggest a pipeline with other tools.
• 888 views
•
link
written
by
avinashbelure3 •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Single Cell Rna Seq Using BD Rhapsody
written by abbas.waseem.gcu •
-
I have RAW Illumina Paired-end sequence in FASTQ format. Can someone please guide me on how to crea…
written by mibtisamnasar •
-
Difference between Whole Exome Sequencing Pipeline for IonTorrent and Illumina?
written by NikhilP •
-
Creating manifest file:Qiime2
written by avinashbelure3 •
-
Which metagenomics tool works best?
written by Seq225
-
RNAseq raw data for expression analysis
written by shuksi1984 •
-
How do i should proceed with 16S rRNA amplicon sequencing data from Illumina MiSeq using QIIME pipe…
written by antonioggsousa
-
Filter out specific reads from FASTQ files
written by Paul
-
Trimmomatic: Trimming only custom adapter sequences
written by lewis.stevens07 •
-
Good Illumina Assemler
written by deepthithomaskannan
In order to get a more useful response, you should include more details in your question - for example, what exactly is your data? Is it shotgun metagenomics, or is it 16S RNA sequences or other selected sequences? What questions are you hoping to answer. Have you gone through the tutorials on the qime-2 website, and if so, which parts of them are you struggling with, or what do you need additional help with?