How to make a centimorgan ruler?
Hi,
Does anyone know how to make a centi-morgan ruler like this image?
https://photos.app.goo.gl/C26yCQrVKVAC3k3s9
(edit: image added)
genome
software error
• 1,374 views
•
link
updated
by
cpad0112
2.1K
• |
written
by
wkmustahs21
3
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
enriched genes PPI network
written by yueli7 25Hello, I want to make a figure just like below Figure 1. I went to string database and made a search: https://string-db.org/cgi/input?sessionId=bHX2BS9VeUGo&input_page_show_search=on. The result just …
-
galaxy prinseq trimmming sequence
written by Rob 18Hi friends, I run prinseq in galaxy with same parameters for my file with 6 sequences twice: why results is different? this is the main …
-
Sanger sequencing Result: Difference between forward and reverse DNA strands
written by shuvo.bgenstu 0From sanger sequencing result, the forward strand sequence is slightly different ( mismatch) from reverse one. Which strand should be considered for detection of mutation …
-
How to download BED file with all the fields?
written by kimkes25 5Hello, **my goal** : to download a certain BED file from ucsc website that contains all these fields: bin chrom chromStart chromEnd name score strand …
-
Does bcftools distinguish between two gene copies on the bacterial genome ?
written by praneeth.bommisetti 0Hey everyone, So I have used bcftools "mpileup" in combination with the multi-allelic caller to discover mutations in desired bacterial RNA samples. Here is some …
-
Is there any way to download knownCanonical set from the NCBI Refseq track as it is possible for th…
written by lakhujanivijay 594From the UCSC genome browser, is there any way to download *knownCanonical* set from the **NCBI Refseq** track as it is possible for the **UCSC** …
-
how to use output of cnvkit to plot
written by guofengwang123 1Anybody could recommend a package for creating this plot using the output of cnvkit? I want to create a plot like this<br> <a href="https://ibb.co/5r5KvZS"><img src="https://i.ibb.co/X7zYpHK/image-chromsome.jpg" …
-
any idea about histogram(graphic) clustering?
written by boaty 24hi guys, I generated more than 10000 transcript coverage histogram and i want to separate them into 2 different categories . group 1, there is …
-
Protein coding annotation from UCSC
written by tim.ivanov.92 4How do i download **only protein-coding** genes from UCSC table browser? I've chosen gencode v19 and genes and gene prediction in settings bars, but i'm …
-
Dividing the groups on the same axis using ggplot2
written by Leite 129Initially I [asked a question][1] of how to make a dotplot from a list of pathways. I was able to generate the graph, but now …
I think LinkageMapView (R) package may help you out in producing such plots. Follow the tutorial here: https://cran.r-project.org/web/packages/LinkageMapView/vignettes/LinkageMapView.html and example image: