How can I read .hwe file from PLINK? converting to VCF?
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What do you mean by:
Output is a plain text file, use any text editor, see the manuals for more info: https://www.cog-genomics.org/plink/1.9/formats#hwe
Thanks, zx8754!
Could you introduce me to the example of a text editor? I mean, how I can see the summary of the test, including x^2, p-value from the HWE test.
I prefer Notepad++.
There are many other alternatives.