Hi,
I was trying to install methyl kit package in R 3.6.1 with the following command but it has error showing that
BiocManager::install("methylkit" , dependencies = TRUE)
library(methylkit)
Error in library(methylkit) : there is no package called ‘methylkit’
Please help as I want to use the below function for annotating CpG sites present in exon, intron & intergenic regions from NGS WGBS data.
gene.obj = read.transcript.features("P:/New folder/refGene.bed.txt", package = "methylKit")
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sinha.puja •
methylKit => with a capital K. In your install command it is lowercase k.
Simply copy the command from here and you'll be fine. https://bioconductor.org/packages/release/bioc/html/methylKit.html
Hello sinha.puja
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