How to find in frame ORF that overlaps a feature?
What is the best way to find the largest ORF that overlaps a given feature and is in the same frame as that feature? I'm doing a project where I do a TBLASTN search to find sequences similar to known genes. I want to find the longest ORF that overlaps each hit and is in the same frame as that hit. What is the best way to do this?
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shjenkins94 •
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