simGWAS for GWAS summary statistics
I am trying to simulate GWAS summary statistics using simGWAS (R package). I visited their gitHub repo ( https://github.com/chr1swallace/simgwas-paper and https://github.com/mdfortune/simGWAS ) and went through their examples, but I am not able to understand how I can generate GWAS summary statistics. I require a table with chromosome, SNP, alleles, Z or P statistics and number of samples per SNP. Does anyone know how I can achieve this using simGWAS or is there a tutorial I can refer to?
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printingdots •
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