Installing DESeq2 on RStudio

While installing the DESeq2 on Rstudio I got a error like this

checking for curl-config... no
Cannot find curl-config
ERROR: configuration failed for package ‘RCurl’
* removing ‘/home/diksha/R/x86_64-pc-linux-gnu-library/3.6/RCurl’
* restoring previous ‘/home/diksha/R/x86_64-pc-linux-gnu-library/3.6/RCurl’
Warning in install.packages :

How to overcome this error

r deseq2

• 2,603 views • link

updated 6.8 years ago by zx8754

• written 6.8 years ago by dikshapandey28 •

It looks like one of the dependency libraries is missing or incorrect. Have you tried googling the error and looking at some of the suggestions, e.g.: https://askubuntu.com/questions/359267/cannot-find-curl-config-in-ubuntu-13-04

• 0 views • link

written 6.8 years ago by Joe

Install curl-config.

• 0 views • link

written 6.8 years ago by ATpoint

0 answers

No answers yet.

More posts like this

Installation error - Seurat/SeuratObject/rgeos - in server-based RStudio
written 4.1 years ago by Heidi •

Hey. Today I can't load the Seurat package: > library(Seurat) Error: package or namespace load failed for ‘Seurat’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck …
DESeq2 installation error
written 4.2 years ago by Forough •

Hello, I am trying to install DESeq2 package but repeatedly I face different errors. In my last try I entered bellow command: BiocManager::install("DESeq2") it was …
can't install cummeRbund
written 5.7 years ago by mewgia •

Hello! I try to install cummerbund. Ubuntu 18.04, R 3.6.3, Bioconductor version 3.10 (BiocManager 1.30.10) using this page https://www.bioconductor.org/packages/3.10/bioc/html/cummeRbund.html for help. But it has errors: …
problem installing rtracklayer
written 6.0 years ago by Meghan.T •

I'm pretty new to Rstudio on ubuntu .so I'm trying to install "rtracklayer" package from BiocManager I used this code: if (!requireNamespace("BiocManager", quietly = TRUE)) …
Isoform switch analyzer installation
written 7.1 years ago by harry •

I install the bioconductor packages for installing the IsoformSwitchAnalyzeR in R but it didn't install. it shows error like - ------------------------- ANTICONF ERROR --------------------------- Configuration …
I couldn't install DEseq2?
written 7.3 years ago by enginbozaba •

I did: if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("DESeq") I got the output and the installation BioC_mirror: https://bioconductor.org Using Bioconductor 3.7 (BiocInstaller 1.30.0), R 3.6.0 …
alao can not install DIffBind on R studio in linux
written 8.2 years ago by mikysyc2016

When I try to install "DiffBind" on R studio, I get the erro below. I use R 3.4 and BIoconductor 3.6. ERROR: configuration failed for …
problems with updating deseq2
written 8.8 years ago by grant.hovhannisyan

Hi All, Previously I was using the old version of DESeq2 and now decided to update to the latest one. I have updated R and …
How to install R pachages in R studio - UBUNTU 16.4 Linux Without ERROR
written 9.9 years ago by insilicobrain •

I am using Ubuntu 16.4.LTS 32 bit OS in R Studio....... while installing R Packeges comming Error message as following ERROR: configuration failed for package …
RCurl instalation problem
written 11.2 years ago by m_punisher6 •

<p>hi all</p> <p>I'm using ubuntu 14.04 and R version 3.2.0, when I want to install RCurl problem, I faced with this error:</p> <pre> checking for …