Error when unzipping .gz files from GATK?
Posting here because it seems to get a faster response. I get this error when trying to do gunzip /vcf.gz of the output of HaplotypeCaller:
gzip: /file: invalid compressed data--crc error
gzip: /file: invalid compressed data--length error
Anyone know what might be wrong? I double checked and they are indeed .gz files.
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