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Genome size estimation using Kmergenie

Hello,Can I use kmergenie for genome size estimation? https://gatb.inria.fr/software/kmergenie/ Regards rahul

next-gen assembly genome sequencing
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updated by onestop_data onestop_data • written by Rahul • Rahul

You could find out by reading Kmergenie paper

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written by Sej Modha Sej Modha

Hi Rahul

You should not ask such questions. If you "google" enough, you should find tutorials/manual for executing possibly any tool.

In case if you run into an issue, post the details here so that others can help.

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written by lakhujanivijay lakhujanivijay

1 answer

Yes, you can!

KmerGenie can be used to estimate the genome size or the best k-mer length to assemble your data. I have written a blog post on how to install and use KmerGenie.

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written by onestop_data onestop_data

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