Hi, I have a theoretical question about how preranked GSEA computes its null distribution of enrichment scores. My understanding is that this is done by …

Hello, I have performed GSEA analysis using the Broad's GSEA software. I now want to create a running enrichment score figure that includes my top …

Dear all, I have been running GSEA, since I am very new to GSEA, I am poking around both R package clusterprofiler and the original …

Hello, I'm trying to create heatmaps based on genes within this [GSEA gene set][1]. There are a lot of genes in this set and I'm …

I am trying to perform a GSEA for ten biochemical properties to check which properties are enriched for my set of genes. I am using …

Does anyone know how to import/read/load the results of the gene set enrichment analysis generated from the GSEA software into R? I want to visualize …

I'm trying to analyse previously published data from microarray chips. Why is there more than one probe per gene? how do i interpret conflicting results …

Hello, I have a seurat object that has 3 conditions merged. When plotting feature plots I can split them using the " split.by = 'stim' …

Hey there! I'm currently working on a functional analysis of RNAseq data. I've used the GSEA tool by the Broad Institute to obtain quick results …

We have been tasked with performing Gene Set Enrichment Analysis (GSEA) on GEO datasets as part of our masters project. These results should then be …