Generating a list of all GI numbers for a genome
How can I find all of the GI numbers from a genome assembly from NCBI?
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DNAlias •
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I recommend you using the accession number rather than the GI number due to inconsistency of GI in different versions.
DNAlias : GI numbers have been deprecated for end users (though they are internally used at NCBI). So you should switch to Accession numbers.