Convert PHASE 2.1 output to DnaSP input or to ped/map or vcf format?
Hello,
Sorry if this is a duplicate question. I have searched but have not found a solution. I have run PHASE 2.1 and now have phased haplotypes. I would like to use these phased haplotypes to run a haplotype analysis and other analysis of DNA polymorphisms. Does anyone know how to convert from the PHASE output to a format that is compatible with either plink and/or DnaSP?
Any suggestions would be appreciated.
Thank you
Janet
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Or to a format compatible with Haploview. Best, Janet