How to convert multiple bam format files into fastas?
I have several bam format files that I need to convert each one to fasta files. I haven't found any commands I can use to convert multiple bam to fasta at one time. It is possible?
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manubiomed20 •
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BAM/SAM to FASTA conversion Use a
forloop or (more elaborate)GNU parallelfor multiple files.You really want to 'convert'? Or do you want to make a consensus sequence?
I believe that reaching consensus would be very useful. how can I do this ? I am really starting with bioinformatics and still have difficulty.
I didn't understand what you meant by " Use um for loop ou (mais elaborado) GNU parallel para vários arquivos'. I am really starting with bioinformatics and still have difficulty.