How to know a total-RNA-seq from NCBI?
I want to use Poly A and ribosomal rna depleted RNA seq to detect Non coding RNA. is there any way to know (without mapping) whether dataset is Whole trascriptomic data or not!! Please help me in this issue!!!
Thanks in advance!!!!
• 1,341 views
•
link
written
by
baurumon •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Dataset or repository to look for RNA seq datasets using ribosomal depletion for liver cancer data.
written by aranyak111 •
-
Are ribosomal protein coding genes depleted as well during rRNA depletion?
written by akibio •
-
RNA-seq alignment against globin genes (HBA1, HBA1, and HBB)
written by mohammedtoufiq91
-
how can I get long non coding RNA from RNA-seq data
written by hodatn •
-
Infer RNA-Seq library preparation from BAM
written by ResearchR
-
Looking For Published Workflows Of Noncoding Rna Analysis
written by games.u.stuff •
-
How to remove probably ribosomal RNA in mRNA-seq data derived from Illumina sequencing?
written by seta
-
Strand-specific vs. non-strand-specific RNAseq
written by Y Tb
-
Scaling sequencing depth for poly-A enriched vs Total RNA
written by createanotherone •
-
Neutral proxies for non-coding dataset
written by AISHA
Advanced query search builder for NCBI SRA can be used for polyA and RNASeq (I could not find the rna depleted part). In NCBI -> SRA -> Advanced search -> Builder
selection -> polya AND source -> transcriptomicplus you can add the organism or tax treeappreciate your help @microfuge