1000 genome copy number variation
I am testing the performance of some cnv detecting tools based on read depth using exome sequencing. For achieving this task, I need gold standard dataset as benchmark.Where can I find these data from 1000 genome project or other project? Thank you.
• 2,347 views
•
link
updated
by
Kevin Blighe
•
written
by
Leon
•
written
by
Leon
1 answer
Please take a look:
- Comprehensively benchmarking applications for detecting copy number variation
- Copy Number Variation detection from 1000 Genomes project exon capture sequencing data
- The phase 3 structural variant dataset
- A: List of CNV (copy number variation) regions in the human genome
Kevin
• 0 views
•
link
written
by
Kevin Blighe
Log in to answer this question.
More posts like this
-
Best Tools and Practices for CNV Variant Calling in WES Data
written by Nadav •
-
Gold standard variant set
written by rse
-
Is there gold standard data for ancestral reconstruction?
written by c_u
-
Somatic CNV Caller for Non-cancer samples (whole genome)
written by dana107 •
-
gold standard for human genome genotyping
written by watermelon1037 •
-
aCGH CNV detection
written by Chico Fernandez •
-
Tools For Analyzing Copy Number Variation
written by 1036268670 •
-
Does read count ratio follow Gaussian distribution?
written by mangfu100
-
Tools For Analyzing Copy Number Variation On All-Tumor Exome-Seq Samples
written by newDNASeqer
-
Validated Copy Number Variation(Cnv) Standard
written by Bioscientist
