Bioinformatics for Proteomics
Hi all!
I am starting to analyze proteomic data and I am looking for a thousand-foot view of the field to know more about experiments, QC, platforms, and pipelines.
I am looking for something like RNA Seqlopedia (https://rnaseq.uoregon.edu/) for RNA Seq.
All help would be appreciated!
Thanks, Matt
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Averaging across multiple proteomic experiments
written by bhumm •
-
How to analyze Exome Seq data for GWAS
written by Kumar
-
DESeq2 comparison of normalized counts from different experiments
written by Matthias •
-
How to obtain the probe density from GEO
written by Natasha •
-
SRA data sets and runs
written by MAPK
-
How many biological replicates needed for ChIP seq experiments?
written by sakibthegreat •
-
Biological replicates for transcript profiling, not differential expression
written by jonathanhira •
-
smallRNA - adaptor trimming stringency
written by ti&te •
-
Analysis of sc-RNA data
written by halo22
-
How to Analyze CNV with Autism
written by huamiiforget •
Some resources to consider:
https://www.broadinstitute.org/proteomics/tutorials-and-workshops
https://datascienceplus.com/proteomics-data-analysis-1-3-data-acquisition-and-cleaning/
https://lgatto.github.io/RforProteomics/articles/RforProteomics.html
https://gtpb.github.io/PDA18/