Off topic: File "checkVCF.py", line 162 and line 128 errors
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Entering edit mode
4.9 years ago
zhangcc89 • 0

Hi, Can experts help me find out how to solve it? Thanks.

python checkVCF.py -r hs37d5.fa -o test example.vcf.gz

Traceback (most recent call last):

  File "checkVCF.py", line 162, in <module>
    banner(logger)
  File "checkVCF.py", line 128, in banner
    print >> logger, "checkVCF.py -- check validity of VCF file for meta-analysis"

***TypeError****: unsupported operand type(s) for >>: 'builtin_function_or_method' and 'Logger'. Did you mean "print(<message>, file=<output_stream>)"?
GWAS • 517 views
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