how to get gff file bos tau8 from ucsc to import in usegalaxy
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5.0 years ago
Kian ▴ 50

how can i get gff file bos tau8 from ucsc to import in usegalaxy? maybe this route:

-usegalaxy
-get data
-UCSC Main table browser
-group:??
-output format:??

thanks

ucsc usegalaxy gff htseq-count • 1.3k views
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5.0 years ago
GenoMax 141k

Use UCSC table browser.

Visit: https://genome.ucsc.edu/cgi-bin/hgTables

cow-gtf

Check Send Output to "Galaxy" box to send the output directly to Galaxy.

Otherwise, you can get the GTF/GFF3 file from Ensembl's Cow genome page.

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