Getting flanking sequences of a Bowtie search
0
0
Entering edit mode
5.0 years ago

As part of a project I am working on I would like to align a sequence using Bowtie and then in addition to that alignment return the 100 or so bases flanking the alignment location on either side. Does anyone know of a good way to do this within python? Thanks!

Bowtie python • 574 views
ADD COMMENT

Login before adding your answer.

Traffic: 2340 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6