This is a test version of Biostars. For the public version, visit https://www.biostars.org.
How to check the allele strand of variants?

Hi all,

I have a list of variants obtained from various GWAS studies, it is important for me that all variant alleles (alternate allele) located on the forward strand. Could you please kindly tell me how I can check this issue to make sure forward strand allele for all variants?

Thanks

variant allele

Hello seta!

Questions similar to yours can already be found at:

We have closed your question to allow us to keep similar content in the same thread.

If you disagree with this please tell us why in a reply below. We'll be happy to talk about it.

Cheers!

0 answers

No answers yet.

Log in to answer this question.