Identification of different bacterial strains in mixed population Sequencing
I want to identify different bacteria in a microbial mixed population using non-16Srna regions. I have two questions- 1. Is there any alternative approach out there may be based on consensus sequence or marker genes of different bacteria or anything else. Most of publications are based on 16sRNA based OTU method. 2. Is there a database listing marker genes of each bacterial species.
Thanks
• 886 views
•
link
written
by
rob.costa1234
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Estimating the Relative Abundance of a Species in a Mixed Microbial Community Using 16S PCR
written by ljrdain2508 •
-
Functional differences in bacterial genomes within a genus
written by lstn •
-
Annotation of 16S rDNA identified bacteria
written by Mahnoor •
-
calculating consensus tree phylogeny
written by Moses
-
How can I get the sequence of 5' and 3' UTR regions of bacterial genome?
written by joannerandy80 •
-
Tutorial: Principles and Workflow of 16S/18S/ITS Amplicon Sequencing
written by contact •
-
Identifying bacterial resistance using plasmid sequencing
written by mohamed_refaat.1992 •
-
Microbiome decontamination from kitome
written by robert.kwapich •
-
Identify common genes and their respective DNA sequences
written by sam •
-
Creating a list of Haemophilus housekeeping genes
written by biotech
